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dotnul.gif (43 bytes)
  Commands:
arrow1.gif (162 bytes)Using RasTop
arrow1.gif (162 bytes)Menu
arrow1.gif (162 bytes)Summary
arrow1.gif (162 bytes)Reference
arrow1.gif (162 bytes)Internal Parameters
arrow1.gif (162 bytes)Atom Expression
arrow1.gif (162 bytes)Color Schemes
arrow1.gif (162 bytes)Atom Sets
arrow1.gif (162 bytes)RasTop World

Command Summary

RasTop Interface:

Menu
   arrow1.gif (162 bytes)File
   arrow1.gif (162 bytes)Edit
   arrow1.gif (162 bytes)Molecule
   arrow1.gif (162 bytes)Atoms
   arrow1.gif (162 bytes)Bonds
   arrow1.gif (162 bytes)Ribbons
   arrow1.gif (162 bytes)Envelops
   arrow1.gif (162 bytes)View		 Mouse
Menu Shortcuts
Main Toolbar
Selection Toolbar
Color Palette
Control Panel
Status Bar
Preferences

RasMol Commands:

Command Reference

Add Backbone Background Bond Cartoon Centre Clipboard Colour
Connect Copy CPK Define Define Dots Echo Exit
HBonds Help Label Load Molecule Monitor Paste Pause
Position Print Quit Refresh Renumber Reset Restrict Ribbons
Rotate Save Scale Script Select Set Show Slab
Source Spacefill SSBonds Star Stereo Strands Structure Trace
Translate Unbond Wireframe Write Zap Zoom    

Internal Parameters

Ambient Axes Background BackFade BondMode Bonds BoundBox Cartoon
CisAngle Coordinates DepthCue Display FontSize FontStroke HBonds HeadLight
Hetero HourGlass Hydrogen Kinemage Menus Monitor Mouse Picking
Radius ShadePower Shadow SlabMode Solvent Specular SpecPower Stereo
SSBonds Strands Transparent UnitCell VectPS Worldepth Write  

Atom Expressions

Primitive expressions Comparison operators Within expression Expression examples

Atom Sets

Acidic Acyclic Aliphatic Alpha Amino Aromatic AT Backbone
Basic Bonded Buried CG Charged Cyclic Cystine Helix
Hetero Hydrogen Hydrophobic Ions Large Ligand Medium Neutral
Nucleic Polar Protein Purine Pyrimidine Selected Sheet Sidechain
Small Solvent Surface Turn Water  

Colour Schemes

Colour names Alt Amino Chain Charge CPK Group NMR model
Shapely Structure Temperature Users HBond type Potential  

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